1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAATgtaagtttttttttcccgaggcgggggatgatggtggctgattttgattttgtgtggtggtgggaattgaatagccatgaaatttcatttgctatatacc...
species | Glycine max |
transcript | GLYMA01G39200.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAAT GGCTATCATGGGGACACATCAGCAACTTTCTATTGTGGAGATGTTGACGATEST: gi|192300116|gb|FG991892.1|FG991892
genomic: GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAATgtaagttttt ... atgattgcagGGCTATCATGGGGACACATCAGCAACTTTCTATTGTGGAGATGTTGATGAT
EST: GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAAT GGCTATCATGGGGACACATCAGCAACTTTCTATTGTGGAGATGTTGATGATEST: gi|51335002|gb|CO978868.1|CO978868
genomic: GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAATgtaagttttt ... atgattgcagGGCTATCATGGGGACACATCAGCAACTTTCTATTGTGGAGATGTTGATGAT
EST: GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAAT GGCTATCATGGGGACACATCAGCAACTTTCTATTGTGGAGATGTTGATGAT
genomic: GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAATgtaagttttt ... atgattgcagGGCTATCATGGGGACACATCAGCAACTTTCTATTGTGGAGATGTTGATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGTGATATAATCAACATTGATGTTACTGTTTATCTAAATgtaagtttttttttcccgaggcgggggatgatggtggctgattttgattttgtgtggtggtgggaattgaatagccatgaaatttcatttgctatatacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggggatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtggtgg