1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AGGAGCTGACGGCGGAGCTTGATGCCGCCGGTTCGAAGCCGTTTAACCCGGAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAgtacgtatctttaatttctcctttgtctttttccttcatttatctctacctagccataatatagagttaggaaccttctaattggttggaatttgctata...
species | Glycine max |
transcript | GLYMA01G03720.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGA GAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAGEST: gi|20075541|gb|BQ094324.1|BQ094324
genomic: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAgtacgtatct ... tatttttcagGAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAG
EST: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGA GAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAGEST: gi|20813446|gb|BQ297924.1|BQ297924
genomic: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAgtacgtatct ... tatttttcagGAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAG
EST: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGA GAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAGEST: gi|16995716|gb|BM085088.1|BM085088
genomic: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAgtacgtatct ... tatttttcagGAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAG
EST: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGA GAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAGEST: gi|209715498|gb|BW684743.1|BW684743
genomic: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAgtacgtatct ... tatttttcagGAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAG
EST: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGA GAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAG
genomic: GAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAgtacgtatct ... tatttttcagGAAAAATCCTTATCTATATGGTGAGCTTGCCAAAGGCCAGAGCCCAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGAGCTGACGGCGGAGCTTGATGCCGCCGGTTCGAAGCCGTTTAACCCGGAGGAGAGGATCAGAACCGGGTTTATTCACTTTAAGAATGAGAAATTTGAgtacgtatctttaatttctcctttgtctttttccttcatttatctctacctagccataatatagagttaggaaccttctaattggttggaatttgctata
- - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT