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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCAACAAAGAAGTTTGAAAAGCTAATCACTGATAAGACGGAAATTGAAGGATTACCTGCTACTGCTCTTGGGTTGGCTGCACAGAGTGCAGTATCCAAGgtgtgtcatattgacatgttttgtacttttattatattctcaaggtatgaaaatcagctatgttgagttctggttacttaatgggcaaatgcag

Basic information

species Glycine max
transcript GLYMA01G02480.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G02480.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv00s0211g00060.t01 (Vitis vinifera), 5'ss of exon 5
TGCAACAAAGAAGTTTGAAAAGCTAATCACTGATAAGACGGAAATTGAAGGATTACCTGCTACTGCTCTTGGGTTGGCTGCACAGAGTGCAGTATCCAAGgtgtgtcatattgacatgttttgtacttttattatattctcaaggtatg---------aaaatcagctatgttg--agttctggttacttaatgggcaaatgcag-----------------
||| |||||||| |||| |||  | || ||||||||||  || ||||||||||| |||||||||||||||||||||||||| || |  ||||| || ||||| | |     |||  |||     | |||| ||   || | ||   ||          ||   |||  || |||  | ||||  |  | |  |  ||  ||||                   
TGCCACAAAGAATTTTGGAAAATTGATAACTGATAAGAAAGATATTGAAGGATTGCCTGCTACTGCTCTTGGGTTGGCTGCTCAAACAGCAGTGTCTAAGgtatttttagctgatttgtagctcaatttttttgc-ttgttaatccatttccttcctcaagtccagtaatattggcaattctcttctcattttttgcttatgctcatctacaatcacttcag