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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTACATGCACCAAGAACAGGACACATACACACAGATGCGAATGTCAACCCAATTACTATAATCTTCTCAACATCTCAGTTTTTCCTTGTTACAGTGAATgtaaggatccaaaaccattattttttttatttctagtggtaacagaatattaggaaaagaaaatgattaaagagatgtttcttgtgttgtgcttctattttcaag

Basic information

species Glycine max
transcript GLYMA20G36700.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22930962|gb|BU548101.1|BU548101
EST:     CAATTACTATAATCTTCTCAACATCTCAGTTTTTCCTTGTTACAGTGAAT                         GTACTCTTGGATCTGATTGTTCGAGACTCGGAATAAAAGTTGCAAATTCAT
genomic: CAATTACTATAATCTTCTCAACATCTCAGTTTTTCCTTGTTACAGTGAATgtaaggatcc ... tattttcaagGTACTCTTGGATCTGATTGTTCGAGACTCGGAATAAAAGTTGCAAATTCAT
EST: gi|7685618|gb|AW756266.1|AW756266
EST:     CAATTACTATAATCTTCTCAACATCTCAGTTNTTCCTTGTTACAGTGAAT                         GTACTCTTGGATCTGATTGTTCGAGACTCGGAATAAAAGTTG
genomic: CAATTACTATAATCTTCTCAACATCTCAGTTTTTCCTTGTTACAGTGAATgtaaggatcc ... tattttcaagGTACTCTTGGATCTGATTGTTCGAGACTCGGAATAAAAGTTG