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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCTCAAAACATCATTGGGACAGCTATGGTTCTGTGCCACCGTTTCTTTGTTCGACAATCACATGCTTGCCATGATAGATTTgtgagttttcatttgttctttagctctgaatacatgttttacttttcttactgaatgtttcagtgaaaaccacatcatccgaaggtttctctctactttt...

Basic information

species Glycine max
transcript GLYMA20G28190.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G28190.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv05s0020g03060.t01 (Vitis vinifera), 5'ss of exon 3
GCCTCAAAACATCATTGGGACAGCTATGGTTCTGTGCCACCGTTTCTTTGTTCGACAATCACATGCTTGCCATGATAGATTTgtgagttttcatttgttctttagctctgaat---acatgttttacttttcttactgaatgtt--tcagtgaaaaccacatcatccgaaggtttctctctactttt
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GCCTCAAACTACTATTGGAACTGCCATGGTTTTATGCCACCGCTTTTTTGTTCGACGTTCGCATGCTTGCCATGATAGATTTgtaagtttccagct--tcttatgttttaaatttgatgggatgtgtatggtttattgaatgatactcaacaagaact-cacaatgaccatgctcttacttattt--