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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TACTAGGAAAGTTTGTGAGCCACTAGAGGAAGATTCCTTTAGACCAATTCTTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatcaacttgtggaatatgttactgatccttatggtagatgatgtggtcaactaaattgcgtcctattttttttattatttcag

Basic information

species Glycine max
transcript GLYMA20G16100.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13181387|gb|BG352657.1|BG352657
EST:     AAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: AAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|192309118|gb|FG999065.1|FG999065
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCGCTGTTTTTTCTGGATATTTTTGCAAACCAGAACAGTTTGGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|209722281|gb|BW675075.1|BW675075
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|14205657|gb|BG839335.1|BG839335
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|208302833|gb|GE100038.1|GE100038
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|192313456|gb|FK005522.1|FK005522
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|58019242|gb|CX705984.1|CX705984
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|209721490|gb|BW672241.1|BW672241
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|58018944|gb|CX705686.1|CX705686
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|11274562|gb|BF324905.1|BF324905
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTTCCTGAG                         GCACTGTCTCTTCTGGATATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATT
EST: gi|21602164|gb|BQ612495.1|BQ612495
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAAC
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAAC
EST: gi|192313455|gb|FK005521.1|FK005521
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|23735151|gb|BU765842.1|BU765842
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
EST: gi|254346210|gb|GR859823.1|GR859823
EST:     TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAG                         GCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT
genomic: TTCACCATTATGATGGCCCTAAGTTCCGTCTTGAACTGAGTGTGCCTGAGgtatgcatca ... attatttcagGCACTGTCTCTTCTGGATATTTTTGCAAACCAGAACAGTTTCGATGACATT