1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATTTCTTTAACTGGAACAGAGTTATAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAGgttagtgagagtatgacagtataatagtatacattttttccccttttatctatatagttattggtgcattcagaaaattaggcagtcacttgaagtaaag...
species | Glycine max |
transcript | GLYMA19G41030.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAG GCTGCACAGCTTEST: gi|14258997|gb|BG881905.1|BG881905
genomic: TAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAGgttagtgaga ... attgtttcagGCTGCACAGCTT
EST: TAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAG GCTGCCCAGCTTCAATTCCGAGGACAAAAAATATGGCAAGCTTCAATGCAGEST: gi|7640347|gb|AW734650.1|AW734650
genomic: TAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAGgttagtgaga ... attgtttcagGCTGCACAGCTTCAATTCCGAGGACAAAAAATATGGCAAGCTGCAATGCAG
EST: TAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAG GCTGCACAGCTTCAATTCCGAGGACAAAAAATATGGCAAGCTGCAATGCAG
genomic: TAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAGgttagtgaga ... attgtttcagGCTGCACAGCTTCAATTCCGAGGACAAAAAATATGGCAAGCTGCAATGCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTCTTTAACTGGAACAGAGTTATAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAGgttagtgagagtatgacagtataatagtatacattttttccccttttatctatatagttattggtgcattcagaaaattaggcagtcacttgaagtaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT