1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCACTGGAATAGAGGGCAGGATCATAAATCTGTCATCAATTGCCCATAACTACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGGgtattttcactttgactccagttgcttctgccctgaatttactgcttcatggttatgattctgataagtagaacttaacatctttttatttcttttctattgatataacttttcag
species | Glycine max |
transcript | GLYMA19G35630.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGNACGAAAAGG TTATGGTNNNAAGAAGGCGTATGGNCAGTCCAAGTTAGCAAACATATTACAEST: gi|31310906|gb|CD396109.1|CD396109
genomic: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGGgtattttcac ... aacttttcagTTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACA
EST: AAGATCAATGAACGAAAAGG TTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACAEST: gi|151409303|gb|EV279111.1|EV279111
genomic: AAGATCAATGAACGAAAAGGgtattttcac ... aacttttcagTTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACA
EST: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGG TTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACAEST: gi|7234016|gb|AW569357.1|AW569357
genomic: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGGgtattttcac ... aacttttcagTTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACA
EST: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGG TTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACAEST: gi|7029898|gb|AW459681.1|AW459681
genomic: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGGgtattttcac ... aacttttcagTTATGGTAACAAGAAGGCGTATGGGCAGTCCAAGTTAGCAAACATATTACA
EST: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAGAGG TTATGGGTA-CAAGAAGGCGTATGGGCAGTCCCAGTTAAGCAAA
genomic: TACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGGgtattttcac ... aacttttcagTTATGG-TAACAAGAAGGCGTATGGGCAGTCCAAGTTA-GCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCACTGGAATAGAGGGCAGGATCATAAATCTGTCATCAATTGCCCATAACTACACTTATAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGGgtattttcactttgactccagttgcttctgccctgaatttactgcttcatggttatgattctgataagtagaacttaacatctttttatttcttttctattgatataacttttcag
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