Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCATGAGAAAGGATATCTTGACTGAAGATGAAACCCGATTTTATGTGGGGGAAACAGTTTTAGCTATTGAATCTATACATAAACACAATTATATACATAGgtatctacaaaattgacaatttacttcatattagtctcgcattctccattatgttatatttaaatatgccatgtaggcttaggttgcaataaacttggaa...

Basic information

species Glycine max
transcript GLYMA19G34920.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G34920.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv07s0005g03690.t01 (Vitis vinifera), 5'ss of exon 4
TCATGAGAAAGGATATCTTGACTGAAGATGAAACCCGATTTTATGTGGGGGAAACAGTTTTAGCTATTGAATCTATACATAAACACAATTATATACATAGgtatctacaaaattgacaatttactt---catat-tagtctcgcattctccattatgttatatttaa---atatgccatgtaggcttaggttgcaata----aacttggaa-------
||||||||||||||| |||||||||||||||  |  |||||||||| || ||||||||||| |||||||||||||| || ||||| ||||| || ||||||| | ||    |     | | |  ||    |||| ||   | ||||  | |   | ||  | | | |   |||  |||   | | |||  ||    ||    || ||| |        
TCATGAGAAAGGATACCTTGACTGAAGATGAGGCTAGATTTTATGTTGGAGAAACAGTTTTGGCTATTGAATCTATTCACAAACATAATTACATTCATAGgtttgtaggggacctttattctttttggctatatgtaacttggcatgattctagaggtcgtttcttattgatacaccaaa-atgattaattttttctatcccaaattgcatgttgcag