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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAGAAGAGCTTTAACGACTTGGAGCAAGTGGGTTGATGCCAACATAAATCCGTCCAAGACCATGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAGgtgaagtacaaagaattgatttaatttagatgtactcatacactatcatttaatcatagattatcatatatggaaaagttgttgacttttatggtaatta...

Basic information

species Glycine max
transcript GLYMA19G33110.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13562740|gb|BG550960.1|BG550960
EST:     CCGTCCAAGACCATGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAG                         TGGTGGACAATGGAATTCAGGTGGACAATGTGATAGTGAAACTGATCCAAT
genomic: CCGTCCAAGACCATGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAGgtgaagtaca ... gatactgcagTGGTGGACAATGGAATTCAGGTGGACAATGTGATAGTGAAACTGATCCAAT
EST: gi|58014828|gb|CX701570.1|CX701570
EST:     CCGTCCAAGACCATGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAG                         TGGTGGACAATGGAATTCAGGTGGACAATGTGATAGTGAAACTGATCCAAT
genomic: CCGTCCAAGACCATGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAGgtgaagtaca ... gatactgcagTGGTGGACAATGGAATTCAGGTGGACAATGTGATAGTGAAACTGATCCAAT