Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAATCTTCATCTTTGAGAAACATACCGGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATTAACAGgtaagaaggagaaatatttcagtactttttttaaaaaaataaaataaaattccctatgaacatttttatgacgtgaaattctgatgaatatctcaaactggcaaaacag

Basic information

species Glycine max
transcript GLYMA19G31320.2
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G31320.2 (Glycine max), 5'ss of exon 4
lower sequence: Vv08s0007g05390.t01 (Vitis vinifera), 5'ss of exon 4
GAATCTTCATCTTTGAGAAACATACCGGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATTAACAGgtaaga---aggagaaatatttcagtactttttttaaaaaaat----aaaataaaattccctatgaacatttttatgacgtgaaattctgatgaatatctcaaactggcaaaacag
|||||||||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| | ||||||| |   |  |  || | ||  | | |  |||  ||    |    |    || |    ||   |   |  || | | ||||||||    | |||   |    ||  ||  ||||
GAATCTTCATCTTTGAGAAATATACCAGTAGTGATCATGTCATCTGAGAATGTGCCTTCAAGGATCACCAGgtaaaactcaaaaacaagaattgggaattcctttccaattcctttccatggaaacacaatctggaagactgattctcaggtgaaattg-actaaatgggt---gctatcattacag