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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTACTCTTGAAGATCTATGGGATGATGAGAAGAAGAAGGCGCAGTTTCATTGGACATTCATATTCTCAAACCTTATTGTGCAATGGGCTCAGTGGTTAGgtatgtgatgctgttttggtttacctctcatacaattaagcttgatagtatgagtagttgagtagtaggttgtttcactgatgttagcatactgcaatgc...

Basic information

species Glycine max
transcript GLYMA19G29990.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8826555|gb|BE210285.1|BE210285
EST:     TTGGACATTCATATTCTCAAACCTTATTGTGCAATGGGCTCAGTGGTTAG                         CAAATTTGGTATTAGGATCTGGATCTA
genomic: TTGGACATTCATATTCTCAAACCTTATTGTGCAATGGGCTCAGTGGTTAGgtatgtgatg ... ttttttgcagCAAATTTGGTATTAGGATCTGGATCTA
EST: gi|15813140|gb|BI785415.1|BI785415
EST:     CTCAAACCTTATTGTGCAATGGGCTCAGTGGTTAG                         CAAATTTGGTATTAGGATCTGGATCTATTCTTGGGCGTCTTTTATCTTTTC
genomic: CTCAAACCTTATTGTGCAATGGGCTCAGTGGTTAGgtatgtgatg ... ttttttgcagCAAATTTGGTATTAGGATCTGGATCTATTCTTGGGCGTCTTTTATCTTTTC
EST: gi|4313915|gb|AI461034.1|AI461034
EST:     TTGGACATTCATATTCTCAAACCTTATTGTGCAATGGGCTCAGTGGTTAG                         CAAATTTGGTATTAGGATCTGGATCTATTCTTGGGCGTCTTTTATCTTTTC
genomic: TTGGACATTCATATTCTCAAACCTTATTGTGCAATGGGCTCAGTGGTTAGgtatgtgatg ... ttttttgcagCAAATTTGGTATTAGGATCTGGATCTATTCTTGGGCGTCTTTTATCTTTTC