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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAATGCCAGTGTTTGACATGATTGAAACTGTGATGGTGAAGAAGTTGAACTTCAAACCTAGTAGTACACTTCGTTTCATTGTACGCAACGTGTATGTGGgtaagtaaacactttctaattattaaagtatatgcttggtcataagcagatatttcagttcatggatatttcattttggtttgtgactcagtgcaattaacatatcattctctttgttttcag

Basic information

species Glycine max
transcript GLYMA19G24520.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G24520.1 (Glycine max), 5'ss of exon 4
lower sequence: GRMZM2G046743_T01 (Zea mays), 5'ss of exon 4
GCAATGCCAGTGTTTGACATGATTGAAACTGTGATGGTGAAGAAGTTGAACTTCAAACCTAGTAGTACACTTCGTTTCATTGTACGCAACGTGTATGTGGgtaagtaaacactttctaattattaaagtatatgcttggtca--taagcagatatttcagttcatggatatttcattttggtttgtgactcagtgcaattaacatatcattctctttgttttcag
|| |||||||||||||||||||| || || ||| ||||||||||| ||  ||||   ||  ||   ||||| ||| ||||    || | ||  ||||| ||||| | ||| |   |     | |      |   ||||  ||    |   |     ||| |  |   |  |     |      |||   |  |||||                            
GCCATGCCAGTGTTTGACATGATAGAGACGGTGCTGGTGAAGAAGCTGCGCTTCCCTCCCGGTCTGACACTGCGTCTCATCTCTCGGACCGCCTATGTTGgtaa-tgaacgccccccgtcaaatctgaactgaacttgtacagccgaattggcgcctcactgaactaaggt---gatgcaacctgtacgtatgtgcag---------------------------