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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCGCTTATGGAATCCTCCTTGTTACGTGGACCACTGCAGCAACGTGTTTCTTTGTAGCATTGCACAATCATCACTGGCTCTGGCTAATCTCAATATTCTCgtatgtttcctgttttcatttgttgcatggttaattgcattaatttagcttcttattgtggattattaaccaatttgcataggagcatcataagaccaagttttttccgcatgccattgttatatatgcgtcctgactcctgaatgatgaatgttacaaaatttctttctgacttttgttgaaactggtcaacttgcag

Basic information

species Glycine max
transcript GLYMA19G23610.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209718452|gb|BW666250.1|BW666250
EST:     TTTGTAGCATTGCACAATCATCACTGGCTCTGGCTAATCTCAATATTCTC                         TGGCATCCAAGTTTGTATGACGA
genomic: TTTGTAGCATTGCACAATCATCACTGGCTCTGGCTAATCTCAATATTCTCgtatgtttcc ... caacttgcagTGGCATCCAAGTTTGTATGACGA
EST: gi|209718453|gb|BW666251.1|BW666251
EST:     TGTAGCATTGCACAATCATCACTGGCTCTGGCTAATCTCAATATTCTC                         TGGCATCCAAG-TTGTTATGACGATTATAAAATATATTCCTCAG
genomic: TGTAGCATTGCACAATCATCACTGGCTCTGGCTAATCTCAATATTCTCgtatgtttcc ... caacttgcagTGGCATCCAAGTTTG-TATGACGATTATAAAATATATTCCTCAG
EST: gi|192331771|gb|FK024875.1|FK024875
EST:     TTTGTAGCATTGCACAATCATCACTGGCTCTGGCTAATCTCAATATTCTC                         TGGCATCCAAGTTTGTATGACGATTATAAAATATATTCC
genomic: TTTGTAGCATTGCACAATCATCACTGGCTCTGGCTAATCTCAATATTCTCgtatgtttcc ... caacttgcagTGGCATCCAAGTTTGTATGACGATTATAAAATATATTCC