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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATATGTAGTGCTTGGCATTCTATATGCATATTTGTTGTACCACTCTTGGACCCCTGAGACAGTTGGACTTATTTTTGCAAGTAAATACTTGCTACCAGAGgtgtgtattcatcaataaagttatatttccctttccaaaacagttatatattactgtgttaccttcttttatactcggtgcag

Basic information

species Glycine max
transcript GLYMA19G06540.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22525471|gb|BU084282.1|BU084282
EST:     CCCCTGAGACAGCTGGACTTATTTTTGCAAGTAAATACTTGCTACCAGAG                         CTGACTAGTATAGGGAAAATGTTCTCCAGTGAGATGACTTTAGCATCAGCT
genomic: CCCCTGAGACAGTTGGACTTATTTTTGCAAGTAAATACTTGCTACCAGAGgtgtgtattc ... ctcggtgcagCTGACTAGTATAGGGAAAATGTTCTCCAGTGAGATGACTTTAGCATCAGCT
EST: gi|9903070|gb|BE612038.1|BE612038
EST:     CCCCTGAGACAGTTGGACTTATTTTTGCAAGTAAATACTTGCTACCAGAG                         CTGACTAGTATAGGGAAAATGTTCTCCAGTGAGATGACTTTAGCATCAGCT
genomic: CCCCTGAGACAGTTGGACTTATTTTTGCAAGTAAATACTTGCTACCAGAGgtgtgtattc ... ctcggtgcagCTGACTAGTATAGGGAAAATGTTCTCCAGTGAGATGACTTTAGCATCAGCT
EST: gi|192310708|gb|FK001132.1|FK001132
EST:     CCCCTGAGACAGTTGGACTTATTTTTGCAAGTAAATACTTGCTACCAGAG                         CTGACTAGTATAGGGAAAATGTTCTCCAGTGAGATGACTTTAGCATCAGCT
genomic: CCCCTGAGACAGTTGGACTTATTTTTGCAAGTAAATACTTGCTACCAGAGgtgtgtattc ... ctcggtgcagCTGACTAGTATAGGGAAAATGTTCTCCAGTGAGATGACTTTAGCATCAGCT