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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCAATTGGTGCGGCTAATGCCCTTGCATTTTTGCATGAGGAAGCTTCAAGACCAGTAATATTTCGAGATTTCAAGACATCTAATGTCCTATTGGATGAGgtaataacttgaatgttccatttcttactatgctaactttcaacatataaacgcctttacctacctcttataatatcatatcattctattttag

Basic information

species Glycine max
transcript GLYMA19G02470.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G02470.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv14s0108g00380.t01 (Vitis vinifera), 5'ss of exon 4
TGCAATTGGTGCGGCTAATGCCCTTGCATTTTTGCATGAGGAAGCTTCAAGACCAGTAATATTTCGAGATTTCAAGACATCTAATGTCCTATTGGATGAGgtaa-taacttgaatgttccatttcttactatgctaactttcaacatataaacgcctttacctacctcttataatatcatatcattctattttag
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TGCACTTGGTGCTGCAAAGGGTCTTGCCTTTCTTCATGAGGAAGCTGAAAGGCCAGTAATATATCGAGATTTTAAAACATCTAATATCCTGTTAGATGTGgtaggtgacttaaa------atgctttgcaaatagtagtcctaacttatccttgtcttatttcaatttgtgaaa---cttgttcttccag-----