1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AATGCCCTCTCAAATCTTTCAAATTCTACAAGACAAAGGAAATTCCCACTGGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTGgtaagatttttaattctcttaagcaattatatctatggtggcgcacgtgcctcaattaatctatcaaaggatataaagaaactcacactaccaataaaac...
species | Glycine max |
transcript | GLYMA19G01470.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTG GGATGCAAGCGCAGTATATGGAAGCAATGGAGAAGTTTTACAGAGAGTGAGEST: gi|5058116|gb|AI736592.1|AI736592
genomic: GGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTGgtaagatttt ... aaaaaaatagGGATGCAAGCGCAGTATATGGAAGCAATGGAGAAGTTTTACAGAGAGTGAG
EST: GGCTTCTTTGAGATTAAATNCGGATCATCAAACATCCGTACACCTTGGTG GGATGCAAGCGCAGTATATGGAAGCAATGGEST: gi|254336835|gb|GR843014.1|GR843014
genomic: GGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTGgtaagatttt ... aaaaaaatagGGATGCAAGCGCAGTATATGGAAGCAATGG
EST: GCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTG GGATGCAAGCGCAGTATATGGAAGCAATGGAGAAGTTTTACAGAGAGTGAGEST: gi|254347310|gb|GR853559.1|GR853559
genomic: GCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTGgtaagatttt ... aaaaaaatagGGATGCAAGCGCAGTATATGGAAGCAATGGAGAAGTTTTACAGAGAGTGAG
EST: GGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTG GGATGCAAGCGCAGTATATGGAAGCAATGGAGAAGTTTTACAGAGAGTGAGEST: gi|209698951|gb|BW652821.1|BW652821
genomic: GGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTGgtaagatttt ... aaaaaaatagGGATGCAAGCGCAGTATATGGAAGCAATGGAGAAGTTTTACAGAGAGTGAG
EST: GGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTG GGATGCAAGCGCAGTATATGGAAGCA
genomic: GGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTGgtaagatttt ... aaaaaaatagGGATGCAAGCGCAGTATATGGAAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATGCCCTCTCAAATCTTTCAAATTCTACAAGACAAAGGAAATTCCCACTGGCTTCTTTGAGATTAAATCCGGATCATCAAACATCCGTACACCTTGGTGgtaagatttttaattctcttaagcaattatatctatggtggcgcacgtgcctcaattaatctatcaaaggatataaagaaactcacactaccaataaaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -taaagaaa