1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGAGGATTTAGTGATGTTCTTTGGAAAGTGAAAAGATATCAAAAAGAAGGTCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAGgtaaacaatttcattatttccattgcttctaaagtacacaactcattttttggggtaaatcaagtaatcttagttgtaaatgataaaaatcaacctttaa...
species | Glycine max |
transcript | GLYMA18G49210.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCCAAGTCCCAGCATTACCTTCAGTTACCATAGTGCTGATGGTGAACAAG GATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAAEST: gi|151393375|gb|EV263250.1|EV263250
genomic: TCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAGgtaaacaatt ... tgtgtttcagGATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAA
EST: TCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAG GATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAAEST: gi|208187227|gb|GD981267.1|GD981267
genomic: TCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAGgtaaacaatt ... tgtgtttcagGATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAA
EST: TCCAAGTCCCAGCATTACCTTCAGTTACCATAGTGCTGATGGTGAACAAG GATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAAEST: gi|207791289|gb|GD760046.1|GD760046
genomic: TCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAGgtaaacaatt ... tgtgtttcagGATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAA
EST: TCCAAGTCCCAGCATTACCTTCAGTTACCATAGTGCTGATGGTGAACAAG GATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAAEST: gi|15201088|gb|BI424687.1|BI424687
genomic: TCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAGgtaaacaatt ... tgtgtttcagGATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAA
EST: TCCAAGTCCCAGCATTACCTTCAGTTACCATAGTGCTGATGGTGAACAAG GATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAA
genomic: TCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAGgtaaacaatt ... tgtgtttcagGATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACGGGGAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAGGATTTAGTGATGTTCTTTGGAAAGTGAAAAGATATCAAAAAGAAGGTCCAAGTCCCAGCATTACCTTCAGATACCATAGTGTTGATGGTGAACAAGgtaaacaatttcattatttccattgcttctaaagtacacaactcattttttggggtaaatcaagtaatcttagttgtaaatgataaaaatcaacctttaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gataaaaa