1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACAGCTTGCGCAGTTTTAGATGTTCTTGGTCCTCCATACTCTGATCCTGATGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAGgtatcttcatatcctttgacaaatactactaaataatgtccattgattaccctttgtccaacttttctggtatcttaatatttttaaacaaatgataatt...
species | Glycine max |
transcript | GLYMA18G49130.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTC-- -AGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTCEST: gi|192303096|gb|FG994214.1|FG994214
genomic: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAGgtatcttcat ... gaaatttcagTAGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTC
EST: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAG TAGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTCEST: gi|192333288|gb|FK026169.1|FK026169
genomic: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAGgtatcttcat ... gaaatttcagTAGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTC
EST: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAG -A--TGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTCEST: gi|51344284|gb|CO985017.1|CO985017
genomic: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAGgtatcttcat ... gaaatttcagTAGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTC
EST: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAG -A--TGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTCEST: gi|254344696|gb|GR851286.1|GR851286
genomic: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAGgtatcttcat ... gaaatttcagTAGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTC
EST: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAG TAGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTC
genomic: TGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAGgtatcttcat ... gaaatttcagTAGATGGACTATCCATACCAGAGGAGGAAAGAACAGCATATGAATGGCTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGCTTGCGCAGTTTTAGATGTTCTTGGTCCTCCATACTCTGATCCTGATGGAAGGCACTGCACATACTACCAGAATTTCCCTTTCTCCAGCTATTCAGgtatcttcatatcctttgacaaatactactaaataatgtccattgattaccctttgtccaacttttctggtatcttaatatttttaaacaaatgataatt
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG