1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AACGAGGGCAAGAGGTGTATGTGAGCAGGTCTCACAAGCGGCATGTGATAAAGGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactgttaatttgcttcaatttaagactaattgtgtggaatgtatatgtatattgtggaattcgttgtgacttgaaattttgatgagttgatgca...
species | Glycine max |
transcript | GLYMA18G48180.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACAEST: gi|193371225|gb|FK338194.1|FK338194
genomic: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
EST: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACAEST: gi|208257253|gb|GE056696.1|GE056696
genomic: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
EST: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACAEST: gi|208038776|gb|GD832786.1|GD832786
genomic: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
EST: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACAEST: gi|193600910|gb|FK552981.1|FK552981
genomic: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
EST: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACAEST: gi|151407974|gb|EV277789.1|EV277789
genomic: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
EST: AGCGGCATGTGATAAAGGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACAEST: gi|208321784|gb|GE124289.1|GE124289
genomic: AGCGGCATGTGATAAAGGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
EST: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACAEST: gi|193710834|gb|FK644689.1|FK644689
genomic: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
EST: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGT TTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
genomic: GGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactg ... cttttgcagtTTTGATGAAGAAATACTTCATGTTTATGGATCTCTGGTTCCTGATCACACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACGAGGGCAAGAGGTGTATGTGAGCAGGTCTCACAAGCGGCATGTGATAAAGGTCGGGACCATGATACGGTTTTTAGTCAAGAGGtgacatactgttaatttgcttcaatttaagactaattgtgtggaatgtatatgtatattgtggaattcgttgtgacttgaaattttgatgagttgatgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG