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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATATTATCATTGCTGCCGTTGGGCAAGCAAACATGGTGAGGGGAAGCTGGATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGGtgagtagattttatatcaagttcgtgtttatagcattctaccaggctcctatcttggttggtgctgtattttaggaatcaatttcatatttaacacttaagtttcaatatcaacattatttaaccaatgcatgtttgggtctatatgtgacagg

Basic information

species Glycine max
transcript GLYMA18G46400.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10253949|gb|BE821764.1|BE821764
EST:     GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGG                         ATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
genomic: GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGGtgagtagatt ... atgtgacaggATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
EST: gi|298192343|gb|HO036425.1|HO036425
EST:     GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGG                         ATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
genomic: GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGGtgagtagatt ... atgtgacaggATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
EST: gi|214005413|gb|DB988961.1|DB988961
EST:     GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGG                         ATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
genomic: GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGGtgagtagatt ... atgtgacaggATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
EST: gi|192307098|gb|FK002722.1|FK002722
EST:     GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGG                         ATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
genomic: GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGGtgagtagatt ... atgtgacaggATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
EST: gi|213602695|gb|DB978110.1|DB978110
EST:     GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGG                         ATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
genomic: GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGGtgagtagatt ... atgtgacaggATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTTTGTTATGAAG
EST: gi|9902082|gb|BE611050.1|BE611050
EST:     GATAAAGCCTGGTGCATTCATTATTGACGTCGGAATCAACCCAGTAGAGG                         ATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTT
genomic: GATAAAGCCTGGTGCAGTCATTATTGACGTCGGAATCAACCCAGTAGAGGtgagtagatt ... atgtgacaggATCCAAATAGTCCCCGAGGTTACAAACTGGTGGGAGATGTT