1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGAGAGGACTCAGATGAAGTTCAAAAAGCTGCAGAAAAGTTGGAACTAGCAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAGtaagttccctactgatatgctcacatcatgttttatttcatttcagttataattgttaaaatgtaccaatggtgcataatttggaaaggaaataaaaaga...
species | Glycine max |
transcript | GLYMA18G46300.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAT TACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACAEST: gi|254340821|gb|GR854549.1|GR854549
genomic: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAGtaagttccct ... gctttccagtTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACA
EST: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGA- TACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACAEST: gi|19054284|gb|BM732951.1|BM732951
genomic: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAGtaagttccct ... gctttccagtTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACA
EST: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAT TACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACAEST: gi|19269299|gb|BM885555.1|BM885555
genomic: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAGtaagttccct ... gctttccagtTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACA
EST: CAGTTAGAGTCCACCCAGCTCGGGATCATGCTGATGCTCTATTTCATGAT TACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCEST: gi|192323774|gb|FK018570.1|FK018570
genomic: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAGtaagttccct ... gctttccagtTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGC
EST: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAT TACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACA
genomic: CAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAGtaagttccct ... gctttccagtTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAGAGGACTCAGATGAAGTTCAAAAAGCTGCAGAAAAGTTGGAACTAGCAGTTAGAGTCCACCCAGCTCGTGATCATGCTGATGCTCTATTTCATGAGtaagttccctactgatatgctcacatcatgttttatttcatttcagttataattgttaaaatgtaccaatggtgcataatttggaaaggaaataaaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaataa