1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGTGTGGTCCTTGTAAGATGATTGCACCATATTACTGTGAGTTATCTGAGAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTGtaagtactgaagctatagacattattatactattatttcagagttattttgtaagaactagtattcccttatatctaaacacaaaacaaactcaagtgcc...
species | Glycine max |
transcript | GLYMA18G44840.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTG ACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAEST: gi|31463850|gb|CD405878.1|CD405878
genomic: GAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTGtaagtactga ... atgttgcaggACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTA
EST: GAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTG ACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAEST: gi|8286114|gb|BE023673.1|BE023673
genomic: GAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTGtaagtactga ... atgttgcaggACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTA
EST: GAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTG ACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTA
genomic: GAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTGtaagtactga ... atgttgcaggACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGTGGTCCTTGTAAGATGATTGCACCATATTACTGTGAGTTATCTGAGAAATACACTTCTATGATGTTCTTGGTAGTTGATGTGGATGAACTAACTGtaagtactgaagctatagacattattatactattatttcagagttattttgtaagaactagtattcccttatatctaaacacaaaacaaactcaagtgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaacaaa