1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCTTATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAggtaagtcttggcactggtttaaacatttctgtgggaagaatagtatccatttgctctaaatgtatctagtgttctttccttcttttcctttttccctaa...
species | Glycine max |
transcript | GLYMA18G17350.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGA GGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACCEST: gi|120495608|gb|EH223775.1|EH223775
genomic: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAggtaagtctt ... tttgcattcaGGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACC
EST: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGA GGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACCEST: gi|208107645|gb|GD903431.1|GD903431
genomic: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAggtaagtctt ... tttgcattcaGGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACC
EST: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGA GGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACCEST: gi|254318885|gb|GR828721.1|GR828721
genomic: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAggtaagtctt ... tttgcattcaGGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACC
EST: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGA GGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACC
genomic: TATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAggtaagtctt ... tttgcattcaGGGTTTGGATTTGCATGATATTTTAGTAGAGACTGAGAAGCGTGGGATACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTAATTTCTGTCATGTCTATGTGGACTAGATTGCAGCCAGCTTATTCGGCAAATATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAggtaagtcttggcactggtttaaacatttctgtgggaagaatagtatccatttgctctaaatgtatctagtgttctttccttcttttcctttttccctaa
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