1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TAGAAGGGCATGGAAGAGATACAATTTGAGCTTAGGTCTTGGACTGAACAAAGTTGCTGGGAAGGTTTTCAGAATTGGACATCTTGGCAACTTGAATGAGgtaatgttgatttccaatcacccatcagcatataatcatgaaactagtttatcctctcggaactcagattgcatttatttgtagtgaagttaagaaattt...
species | Glycine max |
transcript | GLYMA18G14740.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAGTTGCTGGGAAG-TTTTCAGAATTGGACATCTTGGCA-CTTGA-TGAG TTGCA-CTGTTGGGATGTCTAGCTGGTGTGGAGATGATACTGAAAGATEST: gi|192312356|gb|FK005360.1|FK005360
genomic: AAGTTGCTGGGAAGGTTTTCAGAATTGGACATCTTGGCAACTTGAATGAGgtaatgttga ... tattttccagTTGCAACTGTTGGGATGTCTAGCTGGTGTGGAGATGATACTGAAAGAT
EST: AAGTTGCTGGGAAG-TTTTCAGAATTGGACATCTTGGCA-CTTGA-TGAG TTGCA-CTGTTGGGATGTCTAGCTGGTGTGGAGATGATACTGAAAGATGTGEST: gi|31466490|gb|CD408518.1|CD408518
genomic: AAGTTGCTGGGAAGGTTTTCAGAATTGGACATCTTGGCAACTTGAATGAGgtaatgttga ... tattttccagTTGCAACTGTTGGGATGTCTAGCTGGTGTGGAGATGATACTGAAAGATGTG
EST: AAATTGCTGGGAAGGTTTTCAGAATTGGACATCTGGGCAACTTGAATGAG TTGCAACTGTTGGGATGTCTAGCTGGTGTGGAGATGATACTGAAAGATGTGEST: gi|7795420|gb|AW780745.1|AW780745
genomic: AAGTTGCTGGGAAGGTTTTCAGAATTGGACATCTTGGCAACTTGAATGAGgtaatgttga ... tattttccagTTGCAACTGTTGGGATGTCTAGCTGGTGTGGAGATGATACTGAAAGATGTG
EST: AAGTTGCTGGCAAGGTTTTCACAATCGGACATCTTGGCAACTTGAATGAG TAGCATCTGTTGGGATGT
genomic: AAGTTGCTGGGAAGGTTTTCAGAATTGGACATCTTGGCAACTTGAATGAGgtaatgttga ... tattttccagTTGCAACTGTTGGGATGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGAAGGGCATGGAAGAGATACAATTTGAGCTTAGGTCTTGGACTGAACAAAGTTGCTGGGAAGGTTTTCAGAATTGGACATCTTGGCAACTTGAATGAGgtaatgttgatttccaatcacccatcagcatataatcatgaaactagtttatcctctcggaactcagattgcatttatttgtagtgaagttaagaaattt
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