1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCGGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAGtaaggaaatatctgccatttgatttttttcactgctttttcttttgtctattcattgtaatcccaactaggaacataagaaccctaagtatacaccaaaa...
species | Glycine max |
transcript | GLYMA18G04540.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAT TAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACAGTACAAAEST: gi|17023701|gb|BM094735.1|BM094735
genomic: GGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAGtaaggaaata ... cacttttagtTAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACAGTACAAA
EST: GGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAT TAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACAGTACAAAEST: gi|254338486|gb|GR849904.1|GR849904
genomic: GGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAGtaaggaaata ... cacttttagtTAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACAGTACAAA
EST: GGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAT TAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACAGTACAAA
genomic: GGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAGtaaggaaata ... cacttttagtTAATGAAGGCTCAGAGCTCTGAAACTGTGACAGACCCTCCAACAGTACAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCGGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTACAAGtaaggaaatatctgccatttgatttttttcactgctttttcttttgtctattcattgtaatcccaactaggaacataagaaccctaagtatacaccaaaa
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