1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCCTGTCTATTTTAACGAACCACTGTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcctcagctgtgctttcttttgtcacaaagcagttttaaaagcatgatctcctaagttcattttatcaaggtagataatatgcttggttaaatt...
species | Glycine max |
transcript | GLYMA18G01590.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAG GGGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGEST: gi|207691259|gb|GD673239.1|GD673239
genomic: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcct ... cattgtgcagGGG-AATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAG
EST: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAG GGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGCEST: gi|193478188|gb|FK445325.1|FK445325
genomic: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcct ... cattgtgcagGGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGC
EST: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAG GGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGCEST: gi|193493751|gb|FK461397.1|FK461397
genomic: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcct ... cattgtgcagGGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGC
EST: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAG GGGAATGATTTEST: gi|208288716|gb|GE087529.1|GE087529
genomic: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcct ... cattgtgcagGGGAATGATTT
EST: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAG GGGAATGACTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGCEST: gi|193559808|gb|FK510925.1|FK510925
genomic: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcct ... cattgtgcagGGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGC
EST: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAG GGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGCEST: gi|8282551|gb|BE020112.1|BE020112
genomic: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcct ... cattgtgcagGGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGC
EST: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAG GGGAATGACTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGC
genomic: ACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcct ... cattgtgcagGGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCTGTCTATTTTAACGAACCACTGTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGgtcaggtcctcagctgtgctttcttttgtcacaaagcagttttaaaagcatgatctcctaagttcattttatcaaggtagataatatgcttggttaaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG