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TAGTTGAAGACATATACAAGCGAAGGCAGCCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcctttctctcacgtttgtggcatatttaatgagttgtcttaaattaatttgaaattccttatagatcgtaaacacagtagtagtagagggca...
species | Glycine max |
transcript | GLYMA17G14450.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAA TATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAAEST: gi|193701416|gb|FK638175.1|FK638175
genomic: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcc ... ttgttggcagTATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAA
EST: CATTTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAA TATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAAEST: gi|193513335|gb|FK470099.1|FK470099
genomic: CA-TTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcc ... ttgttggcagTATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAA
EST: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAA TATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAAEST: gi|193510231|gb|FK470243.1|FK470243
genomic: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcc ... ttgttggcagTATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAA
EST: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAA TATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAAEST: gi|193648232|gb|FK595733.1|FK595733
genomic: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcc ... ttgttggcagTATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAA
EST: CATTGCCCACCCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAA TATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAAEST: gi|10237389|gb|BE806277.1|BE806277
genomic: CATTGCCCA-CCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcc ... ttgttggcagTATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAA
EST: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAA TATTATTATGTTCTTGTCAGACATGTCTGGAAGGGAACCCTTGTATAGGAA
genomic: CCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcc ... ttgttggcagTATTATTATGTTTTTGTCAGACATGTCTGGAAGGAAACCCTTGTATAGGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGTTGAAGACATATACAAGCGAAGGCAGCCATTGCCCACCTTGGATGCTATATACTTCATCCAGCCAACCAGAGAGAAgtacatatcctttctctcacgtttgtggcatatttaatgagttgtcttaaattaatttgaaattccttatagatcgtaaacacagtagtagtagagggca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctcac