1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CAAGGATGGAGCTTTCCACAAGCGCTTGAGTCGGGAAAAGATCGTTACTGTTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataatttagagtttcttttacttgcaaattgttctgatagattatcatttgaaggattttagctaaaaatttcattgggacagtttagttgttcact...
species | Glycine max |
transcript | GLYMA17G10040.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTAGAGAGTTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAGT ATACTGGGCACTGGTATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATEST: gi|26048842|gb|CA785295.1|CA785295
genomic: TTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataattt ... aaatgtgcagATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCAT
EST: GTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGT ATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATEST: gi|192311694|gb|FK004885.1|FK004885
genomic: GTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataattt ... aaatgtgcagATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCAT
EST: TTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGT ATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATEST: gi|192311693|gb|FK004884.1|FK004884
genomic: TTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataattt ... aaatgtgcagATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCAT
EST: TTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGT ATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATEST: gi|27426720|gb|CA938240.1|CA938240
genomic: TTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataattt ... aaatgtgcagATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCAT
EST: TTAGAGAGTTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAGT ATACTGGGCACTGGTATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATEST: gi|7326640|gb|AW620438.1|AW620438
genomic: TTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataattt ... aaatgtgcagATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCAT
EST: TTAGAGAGTTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAGT ATACTGGGCACTGGTATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCAT
genomic: TTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataattt ... aaatgtgcagATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGGATGGAGCTTTCCACAAGCGCTTGAGTCGGGAAAAGATCGTTACTGTTAGAGAGTTTCTCACACTTCTGAATCTGGATCCAGCAAAGCTGCGCAGTgtaataatttagagtttcttttacttgcaaattgttctgatagattatcatttgaaggattttagctaaaaatttcattgggacagtttagttgttcact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC