1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGAGCAAAGAGAGAAGTTGGGGCTGACTTCTGCACCCAAAGGGCAGTCCAAGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatcaacaactagtaggtgaaagattaaattgttagtgtgtcatttacaataccagttttgtcacagtgtcttcctgattttgatgtgattaata...
species | Glycine max |
transcript | GLYMA17G08450.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AATGCATTTGAAAAAGTTGAG GTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTGEST: gi|151403941|gb|EV273751.1|EV273751
genomic: AATGCATTTGAAAAAGTTGAGgttcgtatca ... cctgaaacagGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
EST: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAG GTTGAGAAAA-TAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTGEST: gi|213598509|gb|DB975940.1|DB975940
genomic: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatca ... cctgaaacagGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
EST: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAG GTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTGEST: gi|14125679|gb|BG790117.1|BG790117
genomic: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatca ... cctgaaacagGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
EST: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAG GTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTGEST: gi|16345689|gb|BI971284.1|BI971284
genomic: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatca ... cctgaaacagGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
EST: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAG GTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTGEST: gi|120492959|gb|EH221126.1|EH221126
genomic: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatca ... cctgaaacagGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
EST: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAG GTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTGEST: gi|16345688|gb|BI971283.1|BI971283
genomic: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatca ... cctgaaacagGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
EST: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAG GTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
genomic: AGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatca ... cctgaaacagGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGCAAAGAGAGAAGTTGGGGCTGACTTCTGCACCCAAAGGGCAGTCCAAGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGgttcgtatcaacaactagtaggtgaaagattaaattgttagtgtgtcatttacaataccagttttgtcacagtgtcttcctgattttgatgtgattaata
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