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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGGCAAACAAGTATCAGgtaaacactttggcttcattcgtgcttcttttgactgattgaagatgtataatattttttttatataatatttacttttaactcatagtactgggtgact...

Basic information

species Glycine max
transcript GLYMA17G07390.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298186094|gb|HO036727.1|HO036727
EST:     ATTTAGGTGGGCAAACAAGTATCAG                         GCCATATTGGA
genomic: ATTTAGGTGGGCAAACAAGTATCAGgtaaacactt ... ttgtccatagGCCATATTGGA
EST: gi|120532471|gb|EH260604.1|EH260604
EST:     ATTTAGGTGGGCAAACAAGTATCAG                         GCCATATTGGAGGTGTTACTTTCCAAATACCCAAGCAATAATCTATGTTGT
genomic: ATTTAGGTGGGCAAACAAGTATCAGgtaaacactt ... ttgtccatagGCCATATTGGAGGTGTTACTTTCCAAATACCCAAGCAATAATCTATGTTGT
EST: gi|208147226|gb|GD944921.1|GD944921
EST:     ATTTAGGTGGGCAAACAAGTATCAG                         GCCATATTGGAGGTGTTACTTTCCAAATACTCAAGCAATAATCTATGTTGT
genomic: ATTTAGGTGGGCAAACAAGTATCAGgtaaacactt ... ttgtccatagGCCATATTGGAGGTGTTACTTTCCAAATACCCAAGCAATAATCTATGTTGT
EST: gi|193708401|gb|FK645423.1|FK645423
EST:     ATTTAGGTGGGCAAACAAGTATCAG                         GCCATATTGGAGGTGTTACTTTCCAAATACTCAAGCAATAATCTATGTTGT
genomic: ATTTAGGTGGGCAAACAAGTATCAGgtaaacactt ... ttgtccatagGCCATATTGGAGGTGTTACTTTCCAAATACCCAAGCAATAATCTATGTTGT