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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTCTGAGAAGCTCCGGATGGCCAGGCTAGATTGTAAAAATGAGGTTGTAGTAGACTTGTTTGCGGGCATTGGCTACTTTGTGCTGTCTTTCCTTGTCAGgtattgtctgtttgtactggcagagctgtgtattaaacttaatctctaattatattgtaatctcttaatgttttggtattgtgacaaaattaccctttag...

Basic information

species Glycine max
transcript GLYMA17G01710.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA17G01710.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv10s0116g01770.t01 (Vitis vinifera), 5'ss of exon 5
TTTCTGAGAAGCTCCGGATGGCCAGGCTAGATTGTAAAAATGAGGTTGTAGTAGACTTGTTTGCGGGCATTGGCTACTTTGTGCTGTCTTTCCTTGTCAGgtattgtctgtttgtactggcagagctgtgtattaaacttaatctctaattatattgtaatctcttaatgttttggtattgtgacaaaattaccctttag------
||||||||||||| || ||||   | ||  |||||| | |||||||| | || ||||||||||| || ||||| ||||||||  || ||||||| |||||||||  | || |   ||||   |    ||  |  |     |   | ||   | |||  | ||   || ||    |  || | || | ||| |      |       
TTTCTGAGAAGCTTCGAATGGGATGTCTGAATTGTAGAGATGAGGTTATTGTGGACTTGTTTGCTGGAATTGGGTACTTTGTATTGCCTTTCCTCGTCAGgtatattgtgatctaactgcttgtttggtagaacagtagcacagttta--caaattacattccgctactg----gaaatagggaaagaataaattccaaatattac