1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGTACTAACAGCTGGGGCAACTCCTGCAATTGAGATATTGTCCTTCTGTTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCTGGgtaatcaatggaactttctcgagcttgtgtttctaatttattgtgctaattttaaaacctaatttaaaaggaattatgcag
species | Glycine max |
transcript | GLYMA16G32860.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCTGG CTTTGACAGAGATGTAAGATGGCGTCCTGGGGTAGACCTAATACCTGTTCAEST: gi|17962963|gb|BM269718.1|BM269718
genomic: TTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCTGGgtaatcaatg ... aattatgcagCTTTGACAGAGATGTAAGATGGCGTCCTGGGGTAGACCTAATACCTGTTCA
EST: TTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCTGG CTTTGACAGAGATGTAAGATGGCGTCCTGGGGTAGACCTAATACCTGTTCA
genomic: TTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCTGGgtaatcaatg ... aattatgcagCTTTGACAGAGATGTAAGATGGCGTCCTGGGGTAGACCTAATACCTGTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTACTAACAGCTGGGGCAACTCCTGCAATTGAGATATTGTCCTTCTGTTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCTGGgtaatcaatggaactttctcgagcttgtgtttctaatttattgtgctaattttaaaacctaatttaaaaggaattatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA