Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAAATATTTGTCATGTCAACAGATAGAGTGGATGGCCTGAAGGAGGACCTGGCTTGGGCATCATATGTTCTGTTGTGCAATACAAATGCCATAGCTATGgtatgtcttgtatattatcattattaatttaaagaaactcatggtaggttgattgctgttggggtttttcatttgtaggttacctttaaataccactttt...

Basic information

species Glycine max
transcript GLYMA16G32270.3
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18039029|gb|BM307323.1|BM307323
EST:     GTTCTGTTGTGCAATACAAATGCCATAGCTATG                         CTAATTTTTATTCAAGGAGAAATATGTGCAAGGGGATACTGGAACATACCG
genomic: GTTCTGTTGTGCAATACAAATGCCATAGCTATGgtatgtcttg ... atctgttcagCTAATTTTTATTCAAGGAGAAATATGTGCAAGGGGATACTGGAACATACCG
EST: gi|9903232|gb|BE612200.1|BE612200
EST:     TGGCTTGGGCATCATATGTTCTGTTGTGCAATACAAATGCCATAGCTATG                         CTAATTTTTATTCAAGGAGAAATATGTGCAAGGGGATACTGGAACATACCG
genomic: TGGCTTGGGCATCATATGTTCTGTTGTGCAATACAAATGCCATAGCTATGgtatgtcttg ... atctgttcagCTAATTTTTATTCAAGGAGAAATATGTGCAAGGGGATACTGGAACATACCG