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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAGAACAACGACGTCCCCCTGCTGGTGTTCGCCTCAAGTCAAAATACAAGGCTTACCAATATGTTCTATGGATTGTCTCGGCCATTTTACTAATTGTTGGgtgagttacttccttaaatccttgaaactcattaagcaatattactgtcatgattcagctgtttttggtataggagatgtaattatattaacttgctata...

Basic information

species Glycine max
transcript GLYMA16G32150.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208258440|gb|GE052899.1|GE052899
EST:     GCTTACCAATATGTTCTATGGATTGTCTCTGCCATTTTACTAATTGTTGG                         GTTATCTATTGCTCTAGTGATGTTATTCCGGGGTGAGAATGGATATGATCA
genomic: GCTTACCAATATGTTCTATGGATTGTCTCGGCCATTTTACTAATTGTTGGgtgagttact ... tgaatgacagGTTATCTATTGCTCTAGTGATGTTATTCCGGGGTGAGAATGGATATGATCA
EST: gi|21676142|gb|BQ628493.1|BQ628493
EST:     GCTTACCAATATGTTCTATGGATTGTCTCGGCCATTTTACTAATTGTTGG                         GTTATCTATTGCTCTAGTGATGTTATTCCGGGGTGAGAATGGATATGATCA
genomic: GCTTACCAATATGTTCTATGGATTGTCTCGGCCATTTTACTAATTGTTGGgtgagttact ... tgaatgacagGTTATCTATTGCTCTAGTGATGTTATTCCGGGGTGAGAATGGATATGATCA
EST: gi|193537689|gb|FK497622.1|FK497622
EST:     CAATATGTTCTATGGATTGTCTCTGCCATTTTACTAATTGTTGG                         GTTATCTATTGCTCTAGTGATGTTATTCCGGGGTGGAGAATGGATATGATC
genomic: CAATATGTTCTATGGATTGTCTCGGCCATTTTACTAATTGTTGGgtgagttact ... tgaatgacagGTTATCTATTGCTCTAGTGATGTTATTCCGGGGTG-AGAATGGATATGATC