1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCAGACATGGACATGATAGCTAATGACCAACAGATTCCAAGATCTGCAAGTTCTGAAGAATATATGTCTGTGCCCATCTCTGAATGTATTTCCAATCAGTgtaaagttcccgactttgctctttttcctttggagttaaaatacagactttgtctaattagatacatgacttaatgaaatgtattggcctttgtcggtta...
species | Glycine max |
transcript | GLYMA16G31900.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AATGTATTTCCAATCAGT GTGTCGTGGGCGCCAAACTGACCAGTTCAGTTCTATCACTGGCTAAAAGTTEST: gi|24136092|gb|BU926602.1|BU926602
genomic: AATGTATTTCCAATCAGTgtaaagttcc ... tatgatctagGTGTCGTGGGCGCCAAACTGACCAGTTCAGTTCTATCACTGGCTAAAAGTT
EST: TTCTGAAGAATATATGTCTGTGCCCATCTCTGAATGTATTTCCAATCAGT GTGTCGTGGGCGCCAAACTGACCAGTTCAG
genomic: TTCTGAAGAATATATGTCTGTGCCCATCTCTGAATGTATTTCCAATCAGTgtaaagttcc ... tatgatctagGTGTCGTGGGCGCCAAACTGACCAGTTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGACATGGACATGATAGCTAATGACCAACAGATTCCAAGATCTGCAAGTTCTGAAGAATATATGTCTGTGCCCATCTCTGAATGTATTTCCAATCAGTgtaaagttcccgactttgctctttttcctttggagttaaaatacagactttgtctaattagatacatgacttaatgaaatgtattggcctttgtcggtta
- - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA