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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGgtgatgatatttacaatcttgtttttgttatgtatatgtgcatagtagtcaatagcatgctatattggagtcgcggagcagagcagccctgagcttctat...

Basic information

species Glycine max
transcript GLYMA16G28350.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192315003|gb|FK010373.1|FK010373
EST:     AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAG                         GCAATAAGTAATCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAAT
genomic: AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGgtgatgatat ... ttttgggcagGCAATAAGTAATCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAAT
EST: gi|6455582|gb|AW186265.1|AW186265
EST:     AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAG                         GCAATAAGTAATCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAAT
genomic: AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGgtgatgatat ... ttttgggcagGCAATAAGTAATCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAAT
EST: gi|213602893|gb|DB972467.1|DB972467
EST:     AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTAAG                         GCAATAAGTAATC
genomic: AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGgtgatgatat ... ttttgggcagGCAATAAGTAATC
EST: gi|298192637|gb|HO033071.1|HO033071
EST:     AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAG                         GCAATAAGTAATCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAGT
genomic: AGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGgtgatgatat ... ttttgggcagGCAATAAGTAATCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAAT