1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCTAACATTTTTGGGAAGAAGAAGCGATGATCCCTCTAGCAAAGATGGTGGCTACATTTGGGAGCTTATGGCTACTGCTCTTAATGATATGGTCTTGCAGgtatacttcgcccagtaatttgttagtgaattattacacttacagatccagtttctcataagttgataaaatgactccccaaaagacgatgcatttttta...
species | Glycine max |
transcript | GLYMA16G24820.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TACATTTGGGAGC-CATGGGCNT-CTGCTCTTAATGATATGGTCTTGCAG GGAATCATAAAAGAAGAGCAGTTAGATACTTTTAACATTCCTCAATACACTEST: gi|13791107|gb|BG653698.1|BG653698
genomic: TACATTTGGGAGCTTAT-GGC-TACTGCTCTTAATGATATGGTCTTGCAGgtatacttcg ... tttgctgcagGGAATCATAAAAGAAGAGCAGTTAGATACTTTTAACATTCCTCTATACACT
EST: GCTACATTTGGGAGCTTATGGCTACTGCTCTTAATGATATGGTCTTGCAG GGAATCATAAAAGAAGAGCAGTTAGATACTTTTAACATTCCTCAATACACT
genomic: GCTACATTTGGGAGCTTATGGCTACTGCTCTTAATGATATGGTCTTGCAGgtatacttcg ... tttgctgcagGGAATCATAAAAGAAGAGCAGTTAGATACTTTTAACATTCCTCTATACACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTAACATTTTTGGGAAGAAGAAGCGATGATCCCTCTAGCAAAGATGGTGGCTACATTTGGGAGCTTATGGCTACTGCTCTTAATGATATGGTCTTGCAGgtatacttcgcccagtaatttgttagtgaattattacacttacagatccagtttctcataagttgataaaatgactccccaaaagacgatgcatttttta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcccca