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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGATgtgagttaacattttttaaacctattcttttgttcatataatttaattgtaatattagttacgaattatgctattcatgttacag

Basic information

species Glycine max
transcript GLYMA16G24170.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6847973|gb|AW350263.1|AW350263
EST:     CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGAT                         TATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
genomic: CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGATgtgagttaac ... catgttacagTATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
EST: gi|208132000|gb|GD932621.1|GD932621
EST:     ACCCGTCCGGACTATTACGGTTCTGAT                         TATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
genomic: ACCCG-CCGGACTATTACGGTTCTGATgtgagttaac ... catgttacagTATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
EST: gi|192321200|gb|FK014290.1|FK014290
EST:     CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGAT                         TATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
genomic: CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGATgtgagttaac ... catgttacagTATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
EST: gi|214007570|gb|DB987371.1|DB987371
EST:     TGGGGCTGGCAGCAGACAGTAAACGCCGGACTATTACGGTTCTGAT                         TATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
genomic: TGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGATgtgagttaac ... catgttacagTATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
EST: gi|208117233|gb|GD918147.1|GD918147
EST:     CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGAT                         TATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
genomic: CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGATgtgagttaac ... catgttacagTATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
EST: gi|192321199|gb|FK014289.1|FK014289
EST:     CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGAT                         TATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG
genomic: CTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGATgtgagttaac ... catgttacagTATGGTAGAGGTTCATATTCATCTTATTACGGGGGTGATGGCTCACATGGG