1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAAGTGGTTAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTGgtaggcatcttaactcttaaggtctctgtcatgccatttatgtattgcattgtaaattgtaattaataatagtctattgtattttctatccatagaaaac...
species | Glycine max |
transcript | GLYMA16G02860.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CGGGCAAAGATAGATCCTGGATTCACAACTCTTG TATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTTTTCAGGGCCTACTATAEST: gi|7692308|gb|AW760418.1|AW760418
genomic: CGGGCAAAGATAGATCCTGGATTCACAACTCTTGgtaggcatct ... tttaattcagTATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTTTTCAGGGCCTACTATA
EST: TAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTG TATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTTTTCAGGGCCTACTATAEST: gi|192315705|gb|FK011173.1|FK011173
genomic: TAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTGgtaggcatct ... tttaattcagTATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTTTTCAGGGCCTACTATA
EST: TAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTG TATGGCAGAAGTTGGAAGAAGAGAATGCCGATTEST: gi|4284582|gb|AI440799.1|AI440799
genomic: TAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTGgtaggcatct ... tttaattcagTATGGCAGAAGTTGGAAGAAGAGAATGCCGATT
EST: TAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTG TATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTTTTCAGGGCCTACTATA
genomic: TAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTGgtaggcatct ... tttaattcagTATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTTTTCAGGGCCTACTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAAGTGGTTAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTGgtaggcatcttaactcttaaggtctctgtcatgccatttatgtattgcattgtaaattgtaattaataatagtctattgtattttctatccatagaaaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG