1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTTGATGGCTTTATTGATTTGGATTCATATGATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcactttttcattatcagtgccaaaatgctatgcttggaaatcagaggaattagatttcatttcaggggtggtcttgtgagtattgtgaccgggatgattttggtgcag
species | Glycine max |
transcript | GLYMA16G01410.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCAEST: gi|6963593|gb|AW432286.1|AW432286
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCAEST: gi|192331743|gb|FK024847.1|FK024847
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCAEST: gi|208332817|gb|GE129096.1|GE129096
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCAEST: gi|192330603|gb|FK021936.1|FK021936
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCAEST: gi|193563475|gb|FK521364.1|FK521364
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCAEST: gi|192328840|gb|FK022584.1|FK022584
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCAEST: gi|208207007|gb|GE008370.1|GE008370
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
EST: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACT ATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
genomic: ATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcac ... tttggtgcagATCTACACGGAGAATTGGGTCAATTCACCTGGACAGATGGAAGATAATTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGATGGCTTTATTGATTTGGATTCATATGATACTATTGCTATGAAACTTAAAGGAGATGGAAGATGTTATATATCTACTgtgagtgcactttttcattatcagtgccaaaatgctatgcttggaaatcagaggaattagatttcatttcaggggtggtcttgtgagtattgtgaccgggatgattttggtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG