Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGCTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgcacacttccattctcttttccacgcatcgtctctgtttcttattttgtttatatattaatttgatttgatgtttcag

Basic information

species Glycine max
transcript GLYMA16G00360.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192332370|gb|FK026035.1|FK026035
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|213607318|gb|DB965148.1|DB965148
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|209699300|gb|BW670264.1|BW670264
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|208282952|gb|GE079818.1|GE079818
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCTCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|213587829|gb|DB959653.1|DB959653
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|192322478|gb|FK014959.1|FK014959
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|192316481|gb|FK006772.1|FK006772
EST:     GTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: GTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|213615347|gb|DB963541.1|DB963541
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|17023211|gb|BM094245.1|BM094245
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|213617072|gb|DB961552.1|DB961552
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|208126057|gb|GD926029.1|GD926029
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|209714829|gb|BW674315.1|BW674315
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|213596059|gb|DB966306.1|DB966306
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|254343639|gb|GR857395.1|GR857395
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|209706650|gb|BW676159.1|BW676159
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|208171646|gb|GD967157.1|GD967157
EST:     TGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: TGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|213600558|gb|DB960106.1|DB960106
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|192329460|gb|FK021858.1|FK021858
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCTCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
EST: gi|213611109|gb|DB972697.1|DB972697
EST:     CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAAT                         GCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT
genomic: CTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATgtaaactgca ... gatgtttcagGCCCACATTGACCAGTGGATTGACTTTTCATCCTTGGAGATCGATGCTAAT