1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGGGTGCAACCCTTTGATAAAAGGTATCAGTACCTCTTGTTTGCTGCTGAACCATATGAAATCGTTGCTTTCAAGgtattttcttacttttggactttctttgcactttgcttttgcctctgtttttgctcattactctacattttcag
species | Glycine max |
transcript | GLYMA15G00840.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: ATCAGTACCTCTTGTTTGCTGCTGAACCATATGAAATCGTTGCTTTCAAG GTGCCCAGCACGGAAGATTGACAAGTACCAAACTCCAA-TTTCTTCTEST: gi|209700591|gb|BW670322.1|BW670322
genomic: ATCAGTACCTCTTGTTTGCTGCTGAACCATATGAAATCGTTGCTTTCAAGgtattttctt ... acattttcagGTGCCCAGCACGGA-GATTGACAAGT-CCA--CTCCAAATTTCTTCT
EST: ATCAGTACCTCTTGTTTGCTGCTGAACCATATGAAATCGTTGCTTTCAAG GTGCCCAGCACGGAGATTGACAAGTCCACTCCAAATTTCTTCTCGCACTGG
genomic: ATCAGTACCTCTTGTTTGCTGCTGAACCATATGAAATCGTTGCTTTCAAGgtattttctt ... acattttcagGTGCCCAGCACGGAGATTGACAAGTCCACTCCAAATTTCTTCTCGCACTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGGTGCAACCCTTTGATAAAAGGTATCAGTACCTCTTGTTTGCTGCTGAACCATATGAAATCGTTGCTTTCAAGgtattttcttacttttggactttctttgcactttgcttttgcctctgtttttgctcattactctacattttcag
- - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - GCTGCT