1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGGTTACACTGGTTCGGATCTATTTGACCTCTGCAAGAAAGCTGCCTATTTTCCAATTAGAGAACTGCTGGACGAAGAGAAGAAAGGGAGAAGTTTTTCTgtgagtgattcatcgttatcttctttctcctttacctacctcaacattttcatttttgtaacattgggtactatgatatctagagctgaaatgtctggaa...
species | Glycine max |
transcript | GLYMA14G26420.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCCAATTAGAGAACTGCTGGACGAAGAGAAGAAAGGGAGAAGTTTTTACT GCTCCCAGACCATTGTCCCAGTTAAGACTTGGAGAAGGTCCTTGCCACTTEST: gi|22933406|gb|BU550545.1|BU550545
genomic: TCCAATTAGAGAACTGCTGGACGAAGAGAAGAAAGGGAGAAGTTTTT-CTgtgagtgatt ... catggttcagGCTCCCAGACCATTGTCCCAGTT-AGACTTGGAGAAGGTCCTTGCCACTT
EST: TTCCAATTAGAGAACTGCTGGACGAAGAGAAGAAAGGGAGAAGTTTTTCT GCTCCCAGACCATTGTCCCAGTTAGACTTGGAGAAGGTCCTTGCCACTTCC
genomic: TTCCAATTAGAGAACTGCTGGACGAAGAGAAGAAAGGGAGAAGTTTTTCTgtgagtgatt ... catggttcagGCTCCCAGACCATTGTCCCAGTTAGACTTGGAGAAGGTCCTTGCCACTTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGTTACACTGGTTCGGATCTATTTGACCTCTGCAAGAAAGCTGCCTATTTTCCAATTAGAGAACTGCTGGACGAAGAGAAGAAAGGGAGAAGTTTTTCTgtgagtgattcatcgttatcttctttctcctttacctacctcaacattttcatttttgtaacattgggtactatgatatctagagctgaaatgtctggaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctttctcc