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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTCGACAAAATCCCCTCTGATTTAGAAGGGATGGAAGCATTAATGGGACATCTATTGGCCTTGATCGATGACATTCACAAATATGTTGATGATGTTGTGgtatgctggcgttgccttctctcttgtttctcgtcacatttcttttaaactgcattcaaccttttattctttcatatcag

Basic information

species Glycine max
transcript GLYMA14G06690.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254338950|gb|GR847667.1|GR847667
EST:     TCTATTGGCCCTTGATCGATGACATTCACAAATATGTTGATGATGTTGTG                         GAAGGGCGTATTGATCCTGACA-CAAAATTGGGAGATTTATATCAGATGCT
genomic: TCTATTGGCC-TTGATCGATGACATTCACAAATATGTTGATGATGTTGTGgtatgctggc ... ttcatatcagGAAGGGCGTATTGATCCTGACAACAAAATTGGGAGATTTATATCAGATGCT
EST: gi|192324171|gb|FK017902.1|FK017902
EST:     TCTATTGGCCTTTGATCGATGACATTCACAAATATGTTGATGATGTTGTG                         GGAAAGGCGTATTGATCCTGACAACAAAATTGGGAGATTTATATCAGATGC
genomic: TCTATTGGCCTT-GATCGATGACATTCACAAATATGTTGATGATGTTGTGgtatgctggc ... ttcatatcagG-AAGGGCGTATTGATCCTGACAACAAAATTGGGAGATTTATATCAGATGC
EST: gi|254338951|gb|GR847668.1|GR847668
EST:     ATCTATTGGCCTTGATCGATGACATTCACAAATATGTTGATGATGTTGTG                         GAAGGGCGTATTGATCCTGACAACAAAATTGGGAGATTTATATCAGATGCT
genomic: ATCTATTGGCCTTGATCGATGACATTCACAAATATGTTGATGATGTTGTGgtatgctggc ... ttcatatcagGAAGGGCGTATTGATCCTGACAACAAAATTGGGAGATTTATATCAGATGCT