1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACCACACATGTTTGTCAATGCCTACAAGAATGTTCTTGCTGTTGCGGTTGAGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAGgtattggctttgacattttgatcaactatcatcaaaatatttctgttgtttttttccttttcatttatgaatttttaacttgaatgcag
species | Glycine max |
transcript | GLYMA14G06630.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAG GATCCAAGTAAAEST: gi|31463459|gb|CD405487.1|CD405487
genomic: AGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAGgtattggctt ... ttgaatgcagGATCCAAGTAAA
EST: AGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAG GATCCAAGTAAATTTGCTGTCGCTGCTGTTGCTGCEST: gi|254339096|gb|GR847813.1|GR847813
genomic: AGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAGgtattggctt ... ttgaatgcagGATCCAAGTAAATTTGCTGTCGCTGCTGTTGCTGC
EST: AGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAG GATCCACCTAAATTTGCTGTCGCTGCTGTTCCCTCCTCCTGCTGCTGAGTC
genomic: AGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAGgtattggctt ... ttgaatgcagGATCCAAGTAAATTTGCTGTCGCTGCTGTTGC-TGCTCCTGCTGCTGAGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCACACATGTTTGTCAATGCCTACAAGAATGTTCTTGCTGTTGCGGTTGAGACAGATTATTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTATCTGAAGgtattggctttgacattttgatcaactatcatcaaaatatttctgttgtttttttccttttcatttatgaatttttaacttgaatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG