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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGTTGTTTCAATCCCAAAAACAAATGAGAACTTCCGCCTGCTCTATGACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtactttttatatggtttatattgaatattgtgattatgagggcgagccctggtgcagcggtaaagttgtgccttggtgacttgttggtcatgggttcga...

Basic information

species Glycine max
transcript GLYMA14G06170.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA14G06170.1 (Glycine max), 5'ss of exon 4
lower sequence: Vv08s0058g00390.t01 (Vitis vinifera), 5'ss of exon 5
ATGTTGTTTCAATCCCAAAAACAAATGAGAACTTCCGCCTGCTCTATGACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtactttttatatggtttatattgaatattg---tgattatgagggc-gagccctggtgcagcggtaaagttgtgccttggtgacttgttggtcatgg-gttcga
||||||| || || || || ||||||||||||||||| || || |||||||| || ||||||||| | || || || || |||||||| ||||||||||   | | ||| |   || |||| ||| |     ||||||      | ||  |    ||   |   | |  ||||  |   |    |||  ||||    ||||  
ATGTTGTATCCATTCCCAAGACAAATGAGAACTTCCGTCTCCTATATGACACAAAGGGCCGATTCAGACTCCACTCAATTAGGGATGAGGAGGCAAAGg---tctgtattttccttctattaaatttcaaattgattactttaactgaatcaaattgattcaaaataagtgtgaatcattatgctgtctgtcacattgttc--
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21601759|gb|BQ612090.1|BQ612090
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|18848488|gb|BM567686.1|BM567686
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|15337125|gb|BI497781.1|BI497781
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6227935|gb|AW156597.1|AW156597
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|192299652|gb|FG987755.1|FG987755
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAATACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|298166678|gb|HO010117.1|HO010117
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|16996475|gb|BM085847.1|BM085847
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|192312625|gb|FK004313.1|FK004313
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|14125494|gb|BG789932.1|BG789932
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATNCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209707198|gb|BW656816.1|BW656816
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|151412561|gb|EV282373.1|EV282373
EST:     ACACTAAAGACCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209718729|gb|BW671930.1|BW671930
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|151396582|gb|EV266459.1|EV266459
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|298186841|gb|HO033940.1|HO033940
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTCGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|7639605|gb|AW733924.1|AW733924
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|11687942|gb|BF595618.1|BF595618
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|14999877|gb|BI320691.1|BI320691
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|15201271|gb|BI424783.1|BI424783
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209705389|gb|BW668019.1|BW668019
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|17023171|gb|BM094205.1|BM094205
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|213614487|gb|DB972811.1|DB972811
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6566530|gb|AW234173.1|AW234173
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|9204413|gb|BE330637.1|BE330637
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|15202529|gb|BI425449.1|BI425449
EST:     GGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: GGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|213620181|gb|DB967496.1|DB967496
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|38192546|gb|CF921752.1|CF921752
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|13791604|gb|BG654195.1|BG654195
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209703748|gb|BW665021.1|BW665021
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|192301197|gb|FG988032.1|FG988032
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|4292392|gb|AI441898.1|AI441898
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|4314036|gb|AI461155.1|AI461155
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCA
EST: gi|192312626|gb|FK004314.1|FK004314
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|17023146|gb|BM094180.1|BM094180
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|151398495|gb|EV268366.1|EV268366
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6847064|gb|AW349354.1|AW349354
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|20813097|gb|BQ297567.1|BQ297567
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|11688388|gb|BF596064.1|BF596064
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAGAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|7042527|gb|AW472421.1|AW472421
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|213606507|gb|DB958989.1|DB958989
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|9205016|gb|BE331240.1|BE331240
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|192328145|gb|FK022854.1|FK022854
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
EST: gi|15204882|gb|BI427650.1|BI427650
EST:     ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtacttttta ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTACAGTTTGGCCAGAAAGGTATCCCA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATGTTGTTTCAATCCCAAAAACAAATGAGAACTTCCGCCTGCTCTATGACACTAAAGGCCGATTCCGTCTTCATTCCATCAGGGATGATGAGGCAAAGgtactttttatatggtttatattgaatattgtgattatgagggcgagccctggtgcagcggtaaagttgtgccttggtgacttgttggtcatgggttcga

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG