1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTTGGTGGTATGGTGTTGTAGGCCACTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTGgtgagttaatgcattttccatttaaatgaatgtgttttatcattctttatattttcttggctgtagattttgccttttatgttttatcattcatttaatc...
species | Glycine max |
transcript | GLYMA14G04080.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTG ACACAGTGGTGCTAGAGTTCAATCAGTACACTCCTGACTCGCGTTGGAGGAEST: gi|209726760|gb|BW654851.1|BW654851
genomic: CTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTGgtgagttaat ... ttggttgcagACACAGTGGTGCTAGAGTTCAATCAGTACACTCCTGACTCGCGTTGGAGGA
EST: CTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTG ACACAGTGGTGCTAGAGTTCAATCAGTACACTCCTGACTCGCGTTGGAGGAEST: gi|6725789|gb|AW310188.1|AW310188
genomic: CTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTGgtgagttaat ... ttggttgcagACACAGTGGTGCTAGAGTTCAATCAGTACACTCCTGACTCGCGTTGGAGGA
EST: CTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTG ACACAGTGGTGCTAGAGTTCAATCAGTACACTCCTGACTCGCGTTGGAGGA
genomic: CTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTGgtgagttaat ... ttggttgcagACACAGTGGTGCTAGAGTTCAATCAGTACACTCCTGACTCGCGTTGGAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGGTGGTATGGTGTTGTAGGCCACTTGGAGTTATGCGATGGGAATGAAAATTACTGCCGTTGTCATAGTAGTGgtgagttaatgcattttccatttaaatgaatgtgttttatcattctttatattttcttggctgtagattttgccttttatgttttatcattcatttaatc
- - - - - - - - - - - - - TTGGAG