1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAGGAGTTCTGAAAGTACTACGGAAAGTATAGAGGAGCTTGAGATGTTGCTGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCGgtaaacatagtgttatctacactaactctttcctttctggcttcataacagtttatcaaccactgtttcctgctttttgtttcag
species | Glycine max |
transcript | GLYMA13G44820.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCG TTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTGEST: gi|9985740|gb|BE659848.1|BE659848
genomic: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCGgtaaacatag ... tttgtttcagTTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTG
EST: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCG TTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTGEST: gi|18038753|gb|BM307047.1|BM307047
genomic: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCGgtaaacatag ... tttgtttcagTTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTG
EST: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCG TTGAAAAGA-TACATTGATGACACAGAAGATTTCATCAACATTCAACTGEST: gi|14990737|gb|BI316410.1|BI316410
genomic: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCGgtaaacatag ... tttgtttcagTTGAAA-GAATACATTGATGACACAGAAGATTTCATCAACATTCAACTG
EST: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCG TCTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTGEST: gi|58014711|gb|CX701453.1|CX701453
genomic: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCGgtaaacatag ... tttgtttcagT-TGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTG
EST: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCG TTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTG
genomic: TGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCGgtaaacatag ... tttgtttcagTTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGAGTTCTGAAAGTACTACGGAAAGTATAGAGGAGCTTGAGATGTTGCTGGAAGCATACTTTGTTGTCATTGATAGCACTCTAAATAAGTTGACATCGgtaaacatagtgttatctacactaactctttcctttctggcttcataacagtttatcaaccactgtttcctgctttttgtttcag
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG