1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACCAACAATATTTGAAGTTGTTACAGCAAAGAAACAAGTTAAAGAGAAGTCTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaatatttttctcccgcacacacgtacatgacaaataaatacagttgttcataaatacttgtctatctgagttgcagtgaaaaacatcaggatgt...
species | Glycine max |
transcript | GLYMA13G42250.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCG CGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGATEST: gi|16280374|gb|BI943929.1|BI943929
genomic: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaata ... ggtggagcagCGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGAT
EST: TTCGGTTTC-AACAACAGGTGGCAGCAAATCTAAGTCTAACTCTAAAGCG CGGGCTTCCGAAACCAAGGGCAGACAATCAAAGCCATTACAACCAAAAGATEST: gi|151396879|gb|EV266752.1|EV266752
genomic: TTCGGTTTCAAACAACA-GTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaata ... ggtggagcagCGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGAT
EST: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCG CGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGATEST: gi|192327672|gb|FK020677.1|FK020677
genomic: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaata ... ggtggagcagCGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGAT
EST: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCG CGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGATEST: gi|8403706|gb|BE059402.1|BE059402
genomic: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaata ... ggtggagcagCGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGAT
EST: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCG CGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGATEST: gi|192327673|gb|FK020678.1|FK020678
genomic: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaata ... ggtggagcagCGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGAT
EST: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCG CGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGAT
genomic: CTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaata ... ggtggagcagCGGGCTTCCGAAACCCAGGGCAGACAATCAAAGCCATTACAACCAAAAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCAACAATATTTGAAGTTGTTACAGCAAAGAAACAAGTTAAAGAGAAGTCTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAGTCTAACTCTAAAGCGgtaaacaatatttttctcccgcacacacgtacatgacaaataaatacagttgttcataaatacttgtctatctgagttgcagtgaaaaacatcaggatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaaaca